It takes more than just the wheel and brakes off another same model to ensure fit. The X1/9 parts will all fit together perfectly - but only on an X1/9, because that was designed from the outset so that all the bits fit together - seems stating the obvious, but it's a point often overlooked. Every part on a car - and I do mean EVERY part - is designed to fit in with every other part. Once you change one part for something different, you start a cascade of modifications that can too often spin out of control, which is why so many well-intentioned custom cars end up as 'unfinished projects'.
Your X1/9 brakes will only fit in your X1/9 wheel if they are both fitted to an X1/9 hub, within an X1/9 wheel arch and on an X1/9 suspension. But you don't have that set up.
And it's no good asking what other people have because no-one else will have EXACTLY the same as you. We've had examples on this Forum where people changing the rear suspension (say, from Bis to a/c or vice versa) have found the clearances on each side are not even the same ON THE SAME CAR! So when attempting something as radical as you are, you will be best advised to work from first principles. If you keep on just buying parts and hoping they will fit you will spend a lot of time and money and only get it sorted by pure chance.
You might find this site helpful in actually quantifying what you have. Once you know key dimensions and more importantly which dimensions you can influence (for example, you can vary an ET by using spacers, you can vary arch clearance by rolling the arch. You can NOT change the size of a brake caliper, or the profile of a rim) then you can start to specify the wheel/brake parts you need, and hopefully have a more structured search:
https://blog.racetechnologies.com/2015/07/31/how-to-measure-your-wheel-for-proper-brake-clearance/Also, once you know the critical dimensions, you can search other makes, instead of limiting yourself to only Fiat parts.
I hope you find a solution to this issue, as you have made a huge investment of time and effort so far (I dread to think what in must have cost!).